数据库名称：TeaCoN
数据库简述：A database of gene co-expression network for tea plant (Camellia sinensis)
所属国家/地区：China
数据库主要信息：TeaCoN featured a comprehensive collection of 261 high-quality RNA-Seq experiments that covered a wide range of tea tissues as well as various treatments for tea plant. In the current version of TeaCoN, 31,968 (94% coverage of the genome) tea gene models were documented. Users can retrieve detailed co-expression information for gene(s) of interest in four aspects: 1) co-expressed genes with the corresponding Pearson correlation coefficients (PCC-values) and statistical P-values, 2) gene information (gene ID, description, symbol, alias, chromosomal location, GO and KEGG annotation), 3) expression profile heatmap of co-expressed genes across seven main tea tissues (e.g., leaf, bud, stem, root), and 4) network visualization of co-expressed genes. We also implemented a gene co-expression analysis, BLAST search function, GO and KEGG enrichment analysis, and genome browser to facilitate use of the database.
建立年份：2020
联系信息：Contact information
University/Institution:
Anhui Agricultural University
Address:
School of sciences, Anhui Agricultural University, Hefei, China
City:
Hefei
Province/State:
Anhui
Country/Region:
China
Contact name (PI/Team):
Shihua Zhang
Contact email (PI/Helpdesk):
zhangshihua@ahau.edu.cn
