RID数据库介绍

数据库名称:RID

数据库简述:Retrovirus Integration Database

所属国家/地区:United States

数据库主要信息:The NCI Retrovirus Integration Database is a MySql-based relational database created for storing and retrieving comprehensive information about retroviral integration sites, primarily, but not exclusively, HIV-1. The database is accessible to the public for submission or extraction of data originating from experiments aimed at collecting information related to retroviral integration sites including: the site of integration into the host genome, the virus family and subtype, the origin of the sample, gene exons/introns associated with integration, and proviral orientation. Information about the references from which the data were collected is also stored in the database. Tools are built into the website that can be used to map the integration sites to UCSC genome browser, to plot the integration site patterns on a chromosome, and to display provirus LTRs in their inserted genome sequence.

建立年份:2016

联系信息:Contact information

University/Institution:
Frederick National Laboratory for Cancer Research

Address:
Advanced Biomedical Computing Center, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research (FNLCR), Frederick, MD, USA.

City:

Province/State:

Country/Region:
United States

Contact name (PI/Team):
Wei Shao

Contact email (PI/Helpdesk):
shaow@mail.nih.gov

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