数据库名称：Dichelobacter nodosus MLST Databases
数据库简述：Dichelobacter nodosus MLST Databases
数据库主要信息：The usage of whole genome sequence data enables the application of MLST, but also core and whole genome MLST for higher levels of strain discrimination with a negligible increase in experimental cost. An MLST database was developed alongside a seven loci scheme using publically available whole genome data from the sequence read archive. Sequence type designation and strain discrimination was compared to previously published data to ensure reproducibility. Multiple D. nodosus isolates from U.K. farms were directly compared to populations from other countries. The U.K. isolates define new clades within the global population of D. nodosus and predominantly consist of serogroups A, B and H, however serogroups C, D, E, and I were also found. The scheme is publically available at https://pubmlst.org/dnodosus/.
University of Nottingham
School of Veterinary Medicine and Science, University of Nottingham, Nottingham, United Kingdom.
Contact name (PI/Team):
Adam M. Blanchard
Contact email (PI/Helpdesk):