coliSNP数据库介绍

数据库名称:coliSNP

数据库简述:

所属国家/地区:Japan

数据库主要信息:We have developed coliSNP, a database server (http://yayoi.kansai.jaea.go.jp/colisnp) that maps non-synonymous single nucleotide polymorphisms (nsSNPs) on the three-dimensional (3D) structure of proteins. Once a week, the SNP data from the dbSNP database and the protein structure data from the Protein Data Bank (PDB) are downloaded, and the correspondence of the two data sets is automatically tabulated in the coliSNP database. Given an amino acid sequence, protein name or PDB ID, the server will immediately provide known nsSNP information, including the amino acid mutation caused by the nsSNP, the solvent accessibility, the secondary structure and the flanking residues of the mutated residue in a single page.

建立年份:2008

联系信息:Contact information

University/Institution:
Japan Atomic Energy Agency

Address:

City:

Province/State:

Country/Region:
Japan

Contact name (PI/Team):
Kono H

Contact email (PI/Helpdesk):
kono.hidetoshi@jaea.go.jp

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