数据库名称:ChromLoops
数据库简述:a comprehensive database for specific protein-mediated chromatin loops in diverse organisms
所属国家/地区:China
数据库主要信息:Chromatin loops (or chromatin interactions) are important elements of chromatin structures. It can help form interactions between regulatory elements, such as promoters, enhancers, silencers, and insulators, thus regulating spatiotemporal gene expression. The current version of ChromLoops integrated 1030 datasets (366 samples) of 13 species of ChIA-PET, HiChIP and PLAC-Seq, and documented a total of 1,491,416,813 high-quality chromatin loops. In addition, we further annotated chromatin loop anchors (genes or regions) with abundant functional annotations information, including enhancers, silencers, SNPs, QTLs, transcription factor binding sites, alternative splicing information, circRNAs, TWAS, chromatin accessibility information and gene expression information.
建立年份:2022
联系信息:Contact information
University/Institution:
Huazhong Agricultural University
Address:
City:
Wuhan
Province/State:
Hubei
Country/Region:
China
Contact name (PI/Team):
Guoliang Li
Contact email (PI/Helpdesk):
guoliang.li@mail.hzau.edu.cn