数据库简述：The Identification and Evolutionary Trends of the Solute Carrier Superfamily in Arthropods
数据库主要信息：Arthropod SLC (solute carrier) presents a comprehensive identification of all 66 human SLC families in 174 arthropod species for which good quality protein sets exist. This was accomplished by designing and implementing an in silico pipeline for SLC annotation (SLC_id) which used HMM and BLAST searches followed by filtering based on length and TM domains. Variation among SLC family sizes was then used to determine evolutionary trends over time and ecological niche. This comprehensive data set will be a useful starting point for elucidating functional roles of the SLC superfamily in arthropods.
Foundation for Research and Technology-Hellas
Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece
Contact name (PI/Team):
Shane M Denecke
Contact email (PI/Helpdesk):